
Plot Model Posterior Quantiles
Source:R/plot_model_posterior_quantiles.R
plot_model_posterior_quantiles.RdCreates visualizations of posterior parameter quantiles from calibration results. Generates both global parameter plots and location-specific parameter plots. Supports comparison of multiple posterior sources.
Usage
plot_model_posterior_quantiles(
csv_files,
output_dir = "./figures",
plot_types = "both",
verbose = TRUE
)Arguments
- csv_files
Character vector of paths to posterior_quantiles.csv files from calc_model_posterior_quantiles()
- output_dir
Directory to save plots (default: "./figures")
- plot_types
Character vector specifying which plot types to create ("global", "location", "both"). Default: "both"
- verbose
Logical, whether to print progress messages (default: TRUE)
Details
The function creates:
Caterpillar plots showing median and credible intervals for each estimation type
Separate plots for global and location-specific parameters
Color-coded visualization by estimation type (automatically detected):
Prior samples (dark grey)
Calibration posterior (blue)
Other types (automatically assigned from color palette)
Supports comparison of any number of estimation types
Dynamically adapts to whatever types are present in the data
Expects standardized CSV format with consistent column names
Saves plots as PNG files in the output directory
Examples
if (FALSE) { # \dontrun{
# Single posterior file
plot_model_posterior_quantiles("posterior_quantiles.csv")
# Compare multiple sources
plot_model_posterior_quantiles(
csv_files = c("bfrs_quantiles.csv", "other_quantiles.csv"),
output_dir = "./comparison_plots"
)
} # }