Index

A

agent-based model antibodies

antibody antigen antigens

B

Boost

boxcar function

C

campaign campaign event campaign file channel

class factory Clausius-Clayperon relation compartmental model configuration file core

D

demographics file deterministic diffusive migration

disability-adjusted life years (DALY) disease-specific build dynamic link library (DLL)

E

EMODule epidemic Epidemiological MODeling software (EMOD) epitope

Eradication.exe Euler method event coordinator exp( exposed

F

flattened file

force of infection (FoI)

H

herd immunity

Heterogeneous Intra-Node Transmission (HINT) high-performance computing (HPC)

I

immune incidence individual properties

infectious input files inset chart intervention

J

JSON (JavaScript Object Notation)

K

Keyhole Markup Language (KML)

Koppen-Geiger Climate Classification System

L

Link-Time Code Generation (LTCG)

loss to follow-up (LTFU) LTFU

M

Message Passing Interface (MPI) microsolver

monolithic build Monte Carlo method

N

node node properties

node-targeted intervention nodes

O

ordinary differential equation (ODE)

output report overlay file

P

prevalence

preview

R

recovered regression test release

reporter reproductive number routine immunization (RI)

S

scenario schema SEIR model SEIRS model SI model simulation simulation burn-in simulation type SIR model SIRS model

SIS model solvers Standard Template Library (STL) state transition event stochastic stochastic die-out subpatent superinfection supplemental immunization activity (SIA) susceptible

T

time step

transmissibility (\beta) tutorial

V

virulence

W

WAIFW matrix

Weibull distribution working directory