HIV Model
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Using the model
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EMOD installation
Overview of EMOD software
Tutorials and simulation examples
Troubleshooting EMOD simulations
Understanding the model
Model overview
HIV disease overview
EMOD parameter reference
Frequently asked questions
Glossary
Advancing the model
EMOD source code installation
EMOD architecture
Debugging and testing
Related documentation
idmtools
idmtools-calibra
hiv-workflow
emodpy-hiv
emodpy
emod-api
HIV Model
IDM docs
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EMOD for HIV
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Index
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Index
A
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B
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C
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D
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E
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F
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G
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H
|
I
|
J
|
K
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L
|
M
|
N
|
O
|
P
|
R
|
S
|
T
|
V
|
W
A
agent-based model
antibodies
antibody
antigen
antigens
apoptosis
ART
B
Boost
boxcar function
C
campaign
campaign event
campaign file
capsid
CD4 cells
cell-mediated immunity
channel
class factory
Clausius-Clayperon relation
coital dilution
compartmental model
configuration file
core
D
demographics file
dendritic cell
destination node
deterministic
diffusive migration
disability-adjusted life years (DALY)
disease-specific build
dynamic link library (DLL)
E
EMODule
entry inhibitors
epidemic
Epidemiological MODeling software (EMOD)
epitope
Eradication.exe
Euler method
event coordinator
exp(
exposed
F
flattened file
force of infection (FoI)
G
glycoproteins
gp120
gp41
H
helper T-cells
herd immunity
Heterogeneous Intra-Node Transmission (HINT)
high-performance computing (HPC)
home node
I
immune
incidence
individual properties
infectious
input files
inset chart
integrase
integrase inhibitors
intervention
J
JSON
(JavaScript Object Notation)
K
Keyhole Markup Language (KML)
Koppen-Geiger Climate Classification System
L
lentivirus
Link-Time Code Generation (LTCG)
loss to follow-up (LTFU)
LTFU
M
Message Passing Interface (MPI)
microsolver
monolithic build
Monte Carlo method
mother-to-child transmission (MTCT)
N
node
node properties
node-targeted intervention
nodes
nonnucleoside reverse transcriptase inhibitors (NNRTIs)
nucleoside reverse transcriptase inhibitors (NRTIs)
O
opportunistic infections
ordinary differential equation (ODE)
origin node
output report
overlay file
P
pair formation algorithm (PFA)
PEP
PMTCT
PrEP
prevalence
preview
protease
protease inhibitors
proteases
pyroptosis
R
recovered
regression test
release
reporter
reproductive number
retrovirus
reverse transcriptase
ribonuclease
routine immunization (RI)
S
scenario
schema
SEIR model
SEIRS model
serodifferent
SI model
simulation
simulation burn-in
simulation type
SIR model
SIRS model
SIS model
solvers
Standard Template Library (STL)
state transition event
stochastic
stochastic die-out
subpatent
superinfection
supplemental immunization activity (SIA)
susceptible
T
time step
transmissibility (\beta)
tutorial
V
vertical transmission
viral load
virion
virulence
W
WAIFW matrix
Weibull distribution
working directory
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