from emod_api import schema_to_class as s2c
from emod_api.interventions import utils
from emod_api.interventions import common
import json
[docs]def new_intervention( camp, sensitivity=1.0, specificity=1.0, days_to_diag = 1, pos_event="TestedPositive", tx_fraction=1.0 ):
"""
TyphoidCarrierDiagnostic intervention wrapper. Just the intervention. No configuration yet.
"""
intervention = s2c.get_class_with_defaults( "TyphoidCarrierDiagnostic", camp.schema_path )
intervention.Base_Sensitivity = sensitivity
intervention.Base_Specificity = specificity
intervention.Days_To_Diagnosis = days_to_diag
intervention.Positive_Diagnosis_Event = pos_event
intervention.Treatment_Fraction = tx_fraction
return intervention
[docs]def new_triggered_intervention(
camp,
start_day=1,
triggers=[ "Births" ],
coverage=1.0,
node_ids=None,
property_restrictions_list=[],
co_event=None # expansion slot
):
"""
Distribute TyphoidCarrierDiagnostic when something happens as determined by a signal published from the
model or another campaign event.
"""
iv = new_intervention( camp )
#event = common.ScheduledCampaignEvent( camp, Start_Day=start_day, Demographic_Coverage=coverage, Intervention_List=[ act_intervention, bcast_intervention ], Node_Ids=nodeIDs, Property_Restrictions=property_restrictions_list )
event = common.TriggeredCampaignEvent( camp, Start_Day=start_day, Triggers=triggers, Demographic_Coverage=coverage, Intervention_List=[ iv ], Node_Ids=node_ids, Property_Restrictions=property_restrictions_list, Event_Name="Triggered Typhoid Vax" )
return event
[docs]def new_scheduled_intervention(
camp,
start_day=1,
coverage=1.0,
node_ids=None,
property_restrictions_list=[],
co_event=None # expansion slot
):
"""
Distribute TyphoidCarrierDiagnostic when something happens as determined by a signal published from the
model or another campaign event.
"""
iv = new_intervention( camp )
#event = common.ScheduledCampaignEvent( camp, Start_Day=start_day, Demographic_Coverage=coverage, Intervention_List=[ act_intervention, bcast_intervention ], Node_Ids=nodeIDs, Property_Restrictions=property_restrictions_list )
event = common.ScheduledCampaignEvent( camp, Start_Day=start_day, Demographic_Coverage=coverage, Intervention_List=[ iv ], Node_Ids=node_ids, Property_Restrictions=property_restrictions_list )
return event
[docs]def new_intervention_as_file( camp, start_day, filename=None ):
import emod_api.campaign as camp
camp.add( new_triggered_intervention( camp, start_day ), first=True )
if filename is None:
filename = "TyphoidCarrierDiagnostic.json"
camp.save( filename )
return filename