Example JSON configuration file#

To use this example configuration file along with the included campaign file, select EMOD 2.7 and SamplesInput from the drop-down boxes that appear after having selected the configuration file while creating a new simulation.

Configuration file#

{
    "parameters": {
        "Acquisition_Blocking_Immunity_Decay_Rate": 0.5,
        "Acquisition_Blocking_Immunity_Duration_Before_Decay": 60,
        "Age_Initialization_Distribution_Type": "DISTRIBUTION_SIMPLE",
        "Animal_Reservoir_Type": "NO_ZOONOSIS",
        "Base_Incubation_Period": 1,
        "Base_Individual_Sample_Rate": 1,
        "Base_Infectious_Period": 4,
        "Base_Infectivity": 0.9357678407400043,
        "Base_Mortality": 0,
        "Base_Population_Scale_Factor": 1,
        "Birth_Rate_Dependence": "POPULATION_DEP_RATE",
        "Birth_Rate_Time_Dependence": "NONE",
        "Burnin_Cache_Mode": "none",
        "Burnin_Cache_Period": 0,
        "Burnin_Name": "",
        "Campaign_Filename": "campaign.json",
        "Climate_Model": "CLIMATE_OFF",
        "Config_Name": "00_Generic_DEFAULT",
        "Custom_Reports_Filename": "NoCustomReports",
        "Death_Rate_Dependence": "NONDISEASE_MORTALITY_OFF",
        "Default_Geography_Initial_Node_Population": 1000,
        "Default_Geography_Torus_Size": 10,
        "Demographics_Filenames": [
            "generic_scenarios_demographics.json"
        ],
        "Enable_Absolute_Time": "NO",
        "Enable_Aging": 1,
        "Enable_Birth": 1,
        "Enable_Default_Reporting": 1,
        "Enable_Default_Shedding_Function": 1,
        "Enable_Demographics_Birth": 0,
        "Enable_Demographics_Builtin": 0,
        "Enable_Demographics_Gender": 1,
        "Enable_Demographics_Initial": 1,
        "Enable_Demographics_Other": 0,
        "Enable_Demographics_Reporting": 1,
        "Enable_Disease_Mortality": 0,
        "Enable_Heterogeneous_Intranode_Transmission": 0,
        "Enable_Immune_Decay": 0,
        "Enable_Immunity": 1,
        "Enable_Interventions": 1,
        "Enable_Maternal_Transmission": 0,
        "Enable_Property_Output": 0,
        "Enable_Spatial_Output": 0,
        "Enable_Superinfection": 0,
        "Enable_Vital_Dynamics": 0,
        "Geography": "",
        "Immunity_Acquisition_Factor": 0,
        "Immunity_Initialization_Distribution_Type": "DISTRIBUTION_OFF",
        "Immunity_Mortality_Factor": 0,
        "Immunity_Transmission_Factor": 0,
        "Incubation_Period_Distribution": "FIXED_DURATION",
        "Individual_Sampling_Type": "TRACK_ALL",
        "Infectivity_Scale_Type": "CONSTANT_INFECTIVITY",
        "Infection_Updates_Per_Timestep": 1,
        "Infectious_Period_Distribution": "EXPONENTIAL_DURATION",
        "Job_Node_Groups": "Chassis08",
        "Job_Priority": "BELOWNORMAL",
        "Listed_Events": [],
        "Load_Balance_Filename": "",
        "Local_Simulation": 0,
        "Maternal_Transmission_Probability": 0,
        "Max_Individual_Infections": 1,
        "Max_Node_Population_Samples": 40,
        "Migration_Model": "NO_MIGRATION",
        "Minimum_Adult_Age_Years": 15,
        "Mortality_Blocking_Immunity_Decay_Rate": 0.001,
        "Mortality_Blocking_Immunity_Duration_Before_Decay": 60,
        "Mortality_Time_Course": "DAILY_MORTALITY",
        "Node_Grid_Size": 0.042,
        "Number_Basestrains": 1,
        "Number_Substrains": 1,
        "Num_Cores": 1,
        "PKPD_Model": "FIXED_DURATION_CONSTANT_EFFECT",
        "Population_Density_C50": 30,
        "Population_Density_Infectivity_Correction": "CONSTANT_INFECTIVITY",
        "Population_Scale_Type": "USE_INPUT_FILE",
        "Report_Event_Recorder": 0,
        "Run_Number": 1,
        "Sample_Rate_Birth": 1,
        "Sample_Rate_0_18mo": 1,
        "Sample_Rate_10_14": 1,
        "Sample_Rate_15_19": 1,
        "Sample_Rate_18mo_4yr": 1,
        "Sample_Rate_20_Plus": 1,
        "Sample_Rate_5_9": 1,
        "Serialization_Test_Cycles": 0,
        "Simulation_Duration": 3616,
        "Simulation_Timestep": 1,
        "Simulation_Type": "GENERIC_SIM",
        "Start_Time": 0,
        "Susceptibility_Scale_Type": "CONSTANT_SUSCEPTIBILITY",
        "Transmission_Blocking_Immunity_Decay_Rate": 0.1,
        "Transmission_Blocking_Immunity_Duration_Before_Decay": 60,
        "x_Air_Migration": 1,
        "x_Birth": 1,
        "x_Local_Migration": 1,
        "x_Other_Mortality": 1,
        "x_Population_Immunity": 1,
        "x_Regional_Migration": 1,
        "x_Sea_Migration": 1,
        "x_Temporary_Larval_Habitat": 1
    }
}