Index C | D | E | G | J | M | O | P | R | S C chemical master equation (CME) compartmental model configuration file cross-entropy method D deterministic E EMODL event queue G Gillespie stochastic simulation algorithm (SSA) J JSON (JavaScript Object Notation) M model file Monte Carlo method O ordinary differential equation (ODE) P partial differential equation (PDE) propensity function R realization S solver species stochastic
