Workflow and calibration tools

IDM also makes several tools available to simplify user interactions with disease models. These tools help with configuration of the model, commissioning and running simulations, calibration, and analysis of modeling results. Several of these tools are specific to the EMOD model, which provides several different simtypes for simulating the transmission dynamics of different diseases.

Model	Tool	Code repository	Tool documentation	Description
Model agnostic	idmtools	InstituteforDiseaseModeling/idmtools	idmtools docs	idmtools is a collection of Python scripts and utilities created to streamline user interactions with disease models, from the creation of input files (if required), to commissioning and running simulations, through the analysis of results. It can be used to interact with a variety of models, such as custom models written in R or Python, Starsim, or EMOD.
Model agnostic	idmtools-local	InstituteforDiseaseModeling/idmtools_local	idmtools-local docs	idmtools_local is a collection of Python scripts and utilities for running idmtools workflows locally.
Model agnostic	idmtools_calibra	InstituteforDiseaseModeling/idmtools-calibra	idmtools_calibra docs	idmtools_calibra is a collection of Python scripts and utilities to aid in model calibration.
EMOD (all simtypes)	emod-api	InstituteforDiseaseModeling/emod-api	emod-api docs	emod-api is a Python library for interacting with EMOD input and output files.
EMOD (all simtypes)	emodpy	InstituteforDiseaseModeling/emodpy	emodpy docs	emodpy is a collection of Python scripts and utilities created to streamline user interactions with EMOD and idmtools, agnostic of the disease being simulated.
EMOD (generic simtype)	emodpy-generic	InstituteforDiseaseModeling/emodpy-generic	emodpy-generic docs	emodpy-generic is a Python library with scripts and tooling to use the EMOD generic model.
EMOD (generic simtype configured for measles)	emodpy-measles	InstituteforDiseaseModeling/emodpy-measles	emodpy-measles docs	emodpy-measles is a Python library with scripts and tooling to model measles with the EMOD generic model.
EMOD (HIV simtype)	emodpy-hiv	InstituteforDiseaseModeling/emodpy-hiv	emodpy-hiv docs	emodpy-hiv is a Python library with scripts and tooling to use the EMOD HIV model.
EMOD (HIV simtype)	hiv_workflow	InstituteforDiseaseModeling/hiv_workflow	hiv_workflow docs	hiv_workflow is a collection of Python scripts and libraries utilizing idmtools, idmtools-calibra, and emodpy-hiv for calibration and running of the EMOD HIV model.
EMOD (malaria simtype)	emodpy-malaria	InstituteforDiseaseModeling/emodpy-malaria	emopdy-malaria docs	emodpy-malaria is a Python library with scripts and tooling to use the EMOD malaria model.
EMOD (TBHIV simtype for tuberculosis)	emodpy-tbhiv	InstituteforDiseaseModeling/emodpy-tbhiv	emodpy-tbhiv docs	emodpy-tbhiv is a Python library with scripts and tooling to use the EMOD tuberculosis (TBHIV) model.