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Compartmental Modeling Software (CMS) 0.9 beta documentation - Home Compartmental Modeling Software (CMS) 0.9 beta documentation - Home
  • Introduction to compartmental modeling
  • Introduction to the software
  • Input and output reference
  • Glossary
  • IDM docs
  • GitHub
  • Introduction to compartmental modeling
  • Introduction to the software
  • Input and output reference
  • Glossary
  • IDM docs
  • GitHub

Section Navigation

  • Model file syntax
    • Custom propensity function
    • Create a spatial model
  • Configuration file syntax
    • Solvers
      • Exact methods
      • Approximate methods
      • Spatial simulation methods
      • Rare event probability estimation
      • Exploratory methods
    • Output
    • Random number library
  • Input and output reference
  • Configuration file syntax
  • Solvers
  • Rare event probability estimation

Rare event probability estimation#

These methods are designed for efficient estimation of rare event probabilities.

  • Doubly weighted stochastic simulation algorithm (dwSSA)
  • State-dependent doubly weighted stochastic simulation algorithm (sdwSSA)

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TransportSSA (ISSA)

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Doubly weighted stochastic simulation algorithm (dwSSA)

  • Introduction to compartmental modeling
  • Introduction to the software
  • Input and output reference
  • Glossary

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