emodpy documentation

emodpy is a collection of Python scripts and utilities created to streamline user interactions with EMOD and idmtools. Additional functionality for interacting with EMOD is provided in the emod_api package and idmtools packages.

See idmtools for a diagram showing how idmtools and each of the related packages are used in an end-to-end workflow using EMOD as the disease transmission model.

• Installation
  • Basic installation
  • Developer installation
• Create simulations
• Create input files
• Run simulations
• Calibrate simulations
• Parameter sweeps and model iteration
• Introduction to analyzers
• Output reports
• Serialization
• API reference
  • emodpy package
    • emodpy.analyzers package
    • emodpy.defaults package
    • emodpy.generic package
    • emodpy.interventions package
    • emodpy.reporters package
    • emodpy.bamboo module
    • emodpy.bamboo_api_utils module
    • emodpy.collections_utils module
    • emodpy.emod_campaign module
    • emodpy.emod_file module
    • emodpy.emod_task module
    • emodpy.utils module
• Frequently asked questions
• Glossary
• Changelog
  • 1.1.0
  • 1.2.0

Related documentation

• emodpy Jupyter notebooks
• EMOD generic
• emod-api
• idmtools