Index

A

add_contacts() (BasePeople method) add_household() (in module synthpops.households) (Pop method) add_layer() (Contacts method) add_ltcf() (in module synthpops.ltcfs) (Pop method) add_school() (Pop method) add_workplace() (in module synthpops.workplaces) (Pop method)

age_range (SchoolTypeByAge attribute) agent-based model append() (Layer method) are_location_constraints_satisfied() (in module synthpops.data) assign_facility_staff() (in module synthpops.ltcfs) assign_uids_by_homes() (in module synthpops.households) axis (plotting_kwargs attribute)

B

BasePeople (class in synthpops.people.people)

binned_values_dist() (in module synthpops.base) brief() (FlexPretty method)

C

calculate_contact_matrix() (in module synthpops.plotting) calculate_location_filename() (in module synthpops.data_distributions) calculate_location_filepath() (in module synthpops.data_distributions) calculate_which_nbrackets_to_use() (in module synthpops.data_distributions) check_all_probability_distribution_nonnegative() (in module synthpops.data) check_all_probability_distribution_sums() (in module synthpops.data) check_array_of_array_entry_lens_arr() (in module synthpops.data) check_array_of_arrays_entry_lens() (in module synthpops.data) check_dist() (in module synthpops.sampling) check_employment_rates_by_age() (in module synthpops.data) check_enrollment_rates_by_age() (in module synthpops.data) check_household_head_age_brackets() (in module synthpops.data) check_household_head_age_distributions_by_family_size() (in module synthpops.data) check_household_size_distribution() (in module synthpops.data) check_location_constraints_satisfied() (in module synthpops.data) check_location_name() (in module synthpops.data) check_ltcf_num_residents_distribution() (in module synthpops.data) check_ltcf_num_staff_distribution() (in module synthpops.data) check_ltcf_resident_to_staff_ratio_distribution() (in module synthpops.data) check_normal() (in module synthpops.sampling) check_poisson() (in module synthpops.sampling) check_population_age_distributions() (in module synthpops.data) check_probability_distribution_nonnegative() (in module synthpops.data) check_probability_distribution_nonnegative_age_distributions() (in module synthpops.data) check_probability_distribution_sum() (in module synthpops.data) check_probability_distribution_sum_age_distributions() (in module synthpops.data) check_school_size_brackets() (in module synthpops.data) check_school_size_distribution() (in module synthpops.data) check_school_size_distribution_by_type() (in module synthpops.data) check_school_types_by_age() (in module synthpops.data) check_truncated_poisson() (in module synthpops.sampling)

check_valid_probability_distributions() (in module synthpops.data) check_workplace_size_counts_by_num_personnel() (in module synthpops.data) checkmem() (in module synthpops.config) choose (in module synthpops.people.utils) choose_r (in module synthpops.people.utils) citations (Location attribute) Classroom (class in synthpops.schools) clean_up_layer_info() (Pop method) compute_information() (Pop method) compute_layer_degree_description() (in module synthpops.contact_networks) compute_summary() (Pop method) contact layers Contacts (class in synthpops.people.people) convert_df_to_json_array() (in module synthpops.data) count() (BasePeople method) count_ages() (in module synthpops.base) count_binned_values() (in module synthpops.base) count_employment_by_age() (in module synthpops.workplaces) (Pop method) count_enrollment_by_age() (in module synthpops.schools) (Pop method) count_enrollment_by_school_type() (in module synthpops.schools) (Pop method) count_household_head_ages() (Pop method) count_household_sizes() (Pop method) count_layer_degree() (in module synthpops.contact_networks) count_ltcf_sizes() (Pop method) count_not() (BasePeople method) count_pop_ages() (Pop method) count_values() (in module synthpops.base) count_workplace_sizes() (Pop method) create_reduced_contacts_with_group_types() (in module synthpops.contact_networks)

D

data_provenance_notices (Location attribute) default_datadir_path() (in module synthpops.defaults) default_plotting_kwargs() (plotting_kwargs method)

defined() (BasePeople method) disp() (FlexPretty method) distribution (PopulationAgeDistribution attribute)

E

edge employment_rates_by_age (Location attribute) (Pop attribute)

enrollment_rates_by_age (Location attribute) (Pop attribute)

F

false() (BasePeople method) fast_choice() (in module synthpops.sampling) filter_people() (in module synthpops.contact_networks) find_contacts (in module synthpops.people.utils)

find_contacts() (Layer method) FlexDict (class in synthpops.people.people) FlexPretty (class in synthpops.people.people) from_df() (Layer method) from_people() (BasePeople method)

G

generate() (Pop method) generate_age_count() (in module synthpops.households) generate_age_count_multinomial() (in module synthpops.households) generate_all_households_fixed_ages() (in module synthpops.households) generate_all_households_infer_ages() (in module synthpops.households) generate_household_head_ages() (in module synthpops.households) generate_household_size_count_from_fixed_pop_size() (in module synthpops.households) generate_household_sizes() (in module synthpops.households) generate_larger_households_fixed_ages() (in module synthpops.households) generate_larger_households_infer_ages() (in module synthpops.households) generate_ltcfs() (in module synthpops.ltcfs) generate_synthetic_population() (in module synthpops.pop) get() (BasePeople method) get_age_by_brackets() (in module synthpops.base) get_age_distribution() (in module synthpops.people.loaders) get_aggregate_ages() (in module synthpops.base) get_aggregate_matrix() (in module synthpops.base) get_all_households() (in module synthpops.households) get_asymmetric_matrix() (in module synthpops.base) get_bin_edges() (in module synthpops.base) get_bin_labels() (in module synthpops.base) get_census_age_brackets() (in module synthpops.data_distributions) get_classroom() (Pop method) (School method) get_contact_counts_by_layer() (in module synthpops.contact_networks) (Pop method) get_contact_matrices() (in module synthpops.data_distributions) get_contact_matrix() (in module synthpops.data_distributions) get_country_aliases() (in module synthpops.people.loaders) get_default_school_size_distr_brackets() (in module synthpops.data_distributions) get_default_school_size_distr_by_type() (in module synthpops.data_distributions) get_default_school_type_age_ranges() (in module synthpops.data_distributions) get_default_school_types_by_age_single() (in module synthpops.data_distributions) get_default_school_types_distr_by_age() (in module synthpops.data_distributions) get_employment_rates() (in module synthpops.data_distributions) get_employment_rates_by_age() (in module synthpops.workplaces) get_enrollment_rates_by_age() (in module synthpops.schools) get_expected_density() (in module synthpops.contact_networks) get_generated_household_size_distribution() (in module synthpops.households) get_generated_school_size_distributions() (in module synthpops.schools) get_generated_workplace_size_distribution() (in module synthpops.workplaces) get_head_age_brackets() (in module synthpops.data_distributions) get_head_age_by_size_distr() (in module synthpops.data_distributions)

get_household() (in module synthpops.households) (Pop method) get_household_head_ages() (Pop method) get_household_head_ages_by_size() (in module synthpops.households) (Pop method) get_household_heads() (in module synthpops.households) (Pop method) get_household_size() (in module synthpops.people.loaders) get_household_size_distr() (in module synthpops.data_distributions) get_household_sizes() (in module synthpops.households) (Pop method) get_ids_by_age() (in module synthpops.base) get_index_by_brackets() (in module synthpops.base) get_list_properties() (Location method) get_location_attr() (in module synthpops.data) get_long_term_care_facility_resident_to_staff_ratios_brackets() (in module synthpops.data_distributions) get_long_term_care_facility_resident_to_staff_ratios_distr() (in module synthpops.data_distributions) get_long_term_care_facility_residents_distr() (in module synthpops.data_distributions) get_long_term_care_facility_residents_distr_brackets() (in module synthpops.data_distributions) get_long_term_care_facility_use_rates() (in module synthpops.data_distributions) get_ltcf() (in module synthpops.ltcfs) (Pop method) get_ltcf_sizes() (in module synthpops.ltcfs) (Pop method) get_nbrackets() (in module synthpops.data_distributions) get_population_age_distribution() (Location method) get_relative_path() (in module synthpops.data) (in module synthpops.data_distributions) get_school() (Pop method) get_school_enrollment_rates() (in module synthpops.data_distributions) get_school_size_brackets() (in module synthpops.data_distributions) get_school_size_distr_by_brackets() (in module synthpops.data_distributions) get_school_size_distr_by_type() (in module synthpops.data_distributions) get_school_type_age_ranges() (in module synthpops.data_distributions) get_school_type_labels() (in module synthpops.schools) get_smoothed_single_year_age_distr() (in module synthpops.data_distributions) get_state_postal_code() (in module synthpops.data_distributions) get_workplace() (in module synthpops.workplaces) (Pop method) get_workplace_size_brackets() (in module synthpops.data_distributions) get_workplace_size_distr_by_brackets() (in module synthpops.data_distributions) get_workplace_sizes() (in module synthpops.workplaces) (Pop method)

H

Household (class in synthpops.households) household contact layer

household_head_age_brackets (Location attribute) household_head_age_distribution_by_family_size (Location attribute) household_size_distribution (Location attribute)

I

indices() (BasePeople method) init_contacts() (BasePeople method) initialize() (plotting_kwargs method) initialize_empty_households() (in module synthpops.households) (Pop method) initialize_empty_ltcfs() (in module synthpops.ltcfs) (Pop method)

initialize_empty_schools() (Pop method) initialize_empty_workplaces() (in module synthpops.workplaces) (Pop method) initialize_households_list() (Pop method) initialize_ltcfs_list() (Pop method) initialize_schools_list() (Pop method) initialize_workplaces_list() (Pop method) items() (FlexDict method)

K

keys() (BasePeople method) (FlexDict method)

L

Layer (class in synthpops.people.people) layer_keys() (BasePeople method) LayerGroup (class in synthpops.base) load() (Pop static method) load_location() (in module synthpops.data_distributions) load_location_from_filepath() (in module synthpops.data) load_location_from_json() (in module synthpops.data) load_location_from_json_str() (in module synthpops.data) location

Location (class in synthpops.data) location_name (Location attribute) lock() (BasePeople method) LongTermCareFacility (class in synthpops.ltcfs) ltcf_num_residents_distribution (Location attribute) ltcf_num_staff_distribution (Location attribute) ltcf_resample_age() (in module synthpops.ltcfs) ltcf_resident_to_staff_ratio_distribution (Location attribute) ltcf_use_rate_distribution (Location attribute)

M

make_contacts() (in module synthpops.contact_networks) make_edgelist() (BasePeople method) make_hybrid_contacts() (in module synthpops.people.makepop) make_microstructured_contacts() (in module synthpops.people.makepop) make_people() (in module synthpops.people.makepop) make_population() (in module synthpops.pop) make_random_contacts() (in module synthpops.people.makepop) make_randpop() (in module synthpops.people.makepop) make_title() (plotting_kwargs method)

map_entries() (in module synthpops.people.loaders) member_ages() (Classroom method) (LayerGroup method) (LongTermCareFacility method) (School method) member_uids (Classroom attribute) (LongTermCareFacility attribute) (School attribute) members (Layer attribute) meta_keys() (Layer method)

N

n_multinomial() (in module synthpops.people.utils) n_neg_binomial() (in module synthpops.people.utils) n_poisson (in module synthpops.people.utils) node

non_teaching_staff_ages() (School method) norm_age_group() (in module synthpops.base) norm_dic() (in module synthpops.base) notes (Location attribute) num_bins (PopulationAgeDistribution attribute)

P

parent (Location attribute) parse_synthpop() (in module synthpops.people.makepop) People (class in synthpops.people.people) Person (class in synthpops.people.people) person() (BasePeople method) plot() (People method) plot_ages() (in module synthpops.plotting) (Pop method) plot_array() (in module synthpops.plotting) plot_contact_counts() (in module synthpops.plotting) (Pop method) plot_contacts() (in module synthpops.plotting) (Pop method) plot_employment_rates_by_age() (in module synthpops.plotting) (Pop method) plot_enrollment_rates_by_age() (in module synthpops.plotting) (Pop method) plot_graph() (People method) plot_household_head_ages_by_size() (in module synthpops.plotting) (Pop method) plot_household_sizes() (in module synthpops.plotting) (Pop method) plot_ltcf_resident_sizes() (in module synthpops.plotting) (Pop method)

plot_people() (Pop method) plot_school_sizes() (in module synthpops.plotting) (Pop method) plot_workplace_sizes() (in module synthpops.plotting) (Pop method) plotting_kwargs (class in synthpops.plotting) poisson (in module synthpops.people.utils) Pop (class in synthpops.pop) pop_inds() (Layer method) pop_item() (Pop method) pop_layer() (Contacts method) populate_all_classrooms() (Pop method) populate_households() (in module synthpops.households) (Pop method) populate_ltcfs() (in module synthpops.ltcfs) (Pop method) populate_parent_data() (in module synthpops.data) populate_parent_data_from_file_path() (in module synthpops.data) populate_parent_data_from_json_obj() (in module synthpops.data) populate_schools() (Pop method) populate_workplaces() (in module synthpops.workplaces) (Pop method) population_age_distributions (Location attribute) PopulationAgeDistribution (class in synthpops.data)

R

random_graph_model() (in module synthpops.contact_networks) read_age_bracket_distr() (in module synthpops.data_distributions) reference_links (Location attribute) remove_duplicates() (BasePeople static method) remove_ltcf_residents_from_potential_workers() (in module synthpops.ltcfs)

resample_age() (in module synthpops.sampling) reset_default_settings() (in module synthpops.defaults) reset_settings() (in module synthpops.defaults) reset_settings_by_key() (in module synthpops.defaults) resident_ages() (LongTermCareFacility method) restore_defaults() (plotting_kwargs method)

S

sample_from_range() (in module synthpops.sampling) sample_single_arr() (in module synthpops.sampling) sample_single_dict() (in module synthpops.sampling) sanitize_location() (in module synthpops.data_distributions) save() (Pop method) save_location_to_filepath() (in module synthpops.data) School (class in synthpops.schools) school contact layer school_size_brackets (Location attribute) school_size_distribution (Location attribute) school_size_distribution_by_type (Location attribute) school_type (SchoolSizeDistributionByType attribute) (SchoolTypeByAge attribute) school_types_by_age (Location attribute) SchoolSizeDistributionByType (class in synthpops.data) SchoolTypeByAge (class in synthpops.data) set() (BasePeople method) set_datadir() (in module synthpops.config) set_default_pop_pars() (plotting_kwargs method) set_figure_display_size() (plotting_kwargs method) set_font() (plotting_kwargs method) set_layer_classes() (Pop method) set_layer_group() (LayerGroup method) set_location_defaults() (in module synthpops.config) set_nbrackets() (in module synthpops.config) set_pars() (BasePeople method) set_seed() (in module synthpops.sampling) show_locations() (in module synthpops.people.loaders) size_distribution (SchoolSizeDistributionByType attribute)

staff_ages() (LongTermCareFacility method) statistic_test() (in module synthpops.sampling) story() (People method) student_ages() (Classroom method) (School method) summarize() (BasePeople method) (Pop method) synthpops (module) synthpops.base (module) synthpops.config (module) synthpops.contact_networks (module) synthpops.data (module) synthpops.data_distributions (module) synthpops.defaults (module) synthpops.households (module) synthpops.ltcfs (module) synthpops.people (module) synthpops.people.country_age_data (module) synthpops.people.household_size_data (module) synthpops.people.loaders (module) synthpops.people.makepop (module) synthpops.people.people (module) synthpops.people.state_age_data (module) synthpops.people.utils (module) synthpops.plotting (module) synthpops.pop (module) synthpops.sampling (module) synthpops.schools (module) synthpops.version (module) synthpops.workplaces (module)

T

teacher_ages() (Classroom method) (School method) time step to_arr() (BasePeople method) to_df() (BasePeople method) (Layer method) to_dict() (Pop method)

to_graph() (BasePeople method) (Contacts method) (Layer method) to_json() (Pop method) to_people() (BasePeople method) (Pop method) true() (BasePeople method)

U

undefined() (BasePeople method) unlock() (BasePeople method)

update() (Layer method) update_defaults() (plotting_kwargs method)

V

validate() (BasePeople method) (Classroom method) (Household method) (Layer method) (LayerGroup method) (LongTermCareFacility method) (School method) (Workplace method)

validate_datadir() (in module synthpops.config) values() (FlexDict method) version_info() (in module synthpops.config)

W

Workplace (class in synthpops.workplaces)

workplace contact layer workplace_size_counts_by_num_personnel (Location attribute)