idmtools.entities.iplatform module#
Here we define the Platform interface.
IPlatform is responsible for all the communication to our platform and translation from idmtools objects to platform specific objects and vice versa.
Copyright 2021, Bill & Melinda Gates Foundation. All rights reserved.
- class idmtools.entities.iplatform.IPlatform(*args, **kwargs)[source]#
Bases:
IItem
,CacheEnabled
Interface defining a platform.
A platform needs to implement basic operation such as:
Creating experiment
Creating simulation
Commissioning
File handling
- static __new__(cls, *args, **kwargs)[source]#
Create a new object.
- Parameters:
args – User inputs.
kwargs – User inputs.
- Returns:
The object created.
- Raises:
ValueError - If the platform was not created as expected. –
- validate_inputs_types() NoReturn [source]#
Validate user inputs and case attributes with the correct data types.
- Returns:
None
- get_item(item_id: str, item_type: ItemType | None = None, force: bool = False, raw: bool = False, **kwargs) Experiment | Suite | Simulation | IWorkflowItem | AssetCollection | None [source]#
Retrieve an object from the platform.
This function is cached; force allows you to force the refresh of the cache. If no object_type is passed, the function will try all the types (experiment, suite, simulation).
- Parameters:
item_id – The ID of the object to retrieve.
item_type – The type of the object to be retrieved.
force – If True, force the object fetching from the platform.
raw – Return either an idmtools object or a platform object.
- Returns:
The object found on the platform or None.
- Raises:
ValueError – If the item type is not supported
UnknownItemException – If the item type is not found on platform
- get_children(item_id: str, item_type: ItemType, force: bool = False, raw: bool = False, item: Any | None = None, **kwargs) Any [source]#
Retrieve the children of a given object.
- Parameters:
item_id – The ID of the object for which we want the children.
force – If True, force the object fetching from the platform.
raw – Return either an idmtools object or a platform object.
item_type – Pass the type of the object for quicker retrieval.
item – optional platform or idm item to use instead of loading
- Returns:
The children of the object or None.
- get_children_by_object(parent: IEntity) List[IEntity] [source]#
Returns a list of children for an entity.
- Parameters:
parent – Parent object
- Returns:
List of children
- get_parent_by_object(child: IEntity) IEntity [source]#
Parent of object.
- Parameters:
child – Child object to find parent for
- Returns:
Returns parent object
- get_parent(item_id: str, item_type: ItemType | None = None, force: bool = False, raw: bool = False, **kwargs)[source]#
Retrieve the parent of a given object.
- Parameters:
item_id – The ID of the object for which we want the parent.
force – If True, force the object fetching from the platform.
raw – Return either an idmtools object or a platform object.
item_type – Pass the type of the object for quicker retrieval.
- Returns:
The parent of the object or None.
- get_cache_key(force, item_id, item_type, kwargs, raw, prefix='p')[source]#
Get cache key for an item.
- Parameters:
force – Should we force the load
item_id – Item id
item_type – Item type
kwargs – Kwargs
raw – Should we use raw storage?
prefix – Prefix for the item
- Returns:
Cache Key
- create_items(items: List[IEntity] | IEntity, **kwargs) List[IEntity] [source]#
Create items (simulations, experiments, or suites) on the platform.
The function will batch the items based on type and call the self._create_batch for creation.
- Parameters:
items – The list of items to create.
kwargs – Extra arguments
- Returns:
List of item IDs created.
- run_items(items: IEntity | List[IEntity], **kwargs)[source]#
Run items on the platform.
- Parameters:
items – Items to run
- Returns:
None
- validate_item_for_analysis(item: object, analyze_failed_items=False)[source]#
Check if item is valid for analysis.
- Parameters:
item – Which item to flatten
analyze_failed_items – bool
Returns: bool
- flatten_item(item: object, **kwargs) List[object] [source]#
Flatten an item: resolve the children until getting to the leaves.
For example, for an experiment, will return all the simulations. For a suite, will return all the simulations contained in the suites experiments.
- Parameters:
item – Which item to flatten
kwargs – extra parameters
- Returns:
List of leaves
- refresh_status(item: IEntity) NoReturn [source]#
Populate the platform item and specified item with its status.
- Parameters:
item – The item to check status for.
- get_files(item: IEntity, files: Set[str] | List[str], output: str | None = None, **kwargs) Dict[str, Dict[str, bytearray]] | Dict[str, bytearray] [source]#
Get files for a platform entity.
- Parameters:
item – Item to fetch files for
files – List of file names to get
output – save files to
kwargs – Platform arguments
- Returns:
For simulations, this returns a dictionary with filename as key and values being binary data from file or a dict.
For experiments, this returns a dictionary with key as sim id and then the values as a dict of the simulations described above
- get_files_by_id(item_id: str, item_type: ItemType, files: Set[str] | List[str], output: str | None = None) Dict[str, Dict[str, bytearray]] | Dict[str, bytearray] [source]#
Get files by item id (str).
- Parameters:
item_id – COMPS Item, say, Simulation Id or WorkItem Id
item_type – Item Type
files – List of files to retrieve
output – save files to
Returns: dict with key/value: file_name/file_content
- are_requirements_met(requirements: PlatformRequirements | Set[PlatformRequirements]) bool [source]#
Does the platform support the list of requirements.
- Parameters:
requirements – Requirements should be a list of PlatformRequirements or a single PlatformRequirements
- Returns:
True if all the requirements are supported
- is_task_supported(task: ITask) bool [source]#
Is a task supported on this platform.
This depends on the task properly setting its requirements. See
idmtools.entities.itask.ITask.platform_requirements
andidmtools.entities.platform_requirements.PlatformRequirements
- Parameters:
task – Task to check support of
- Returns:
True if the task is supported, False otherwise.
- wait_till_done(item: IRunnableEntity, timeout: int = 86400, refresh_interval: int = 5, progress: bool = True)[source]#
Wait for the experiment to be done.
- Parameters:
item – Experiment/Workitem to wait on
refresh_interval – How long to wait between polling.
timeout – How long to wait before failing.
progress – Should we display progress
See also
idmtools.entities.iplatform.IPlatform.wait_till_done_progress()
idmtools.entities.iplatform.IPlatform.__wait_until_done_progress_callback()
idmtools.entities.iplatform.IPlatform.__wait_till_callback()
- wait_till_done_progress(item: IRunnableEntity, timeout: int = 86400, refresh_interval: int = 5, wait_progress_desc: str | None = None)[source]#
Wait on an item to complete with progress bar.
- Parameters:
item – Item to monitor
timeout – Timeout on waiting
refresh_interval – How often to refresh
wait_progress_desc – Wait Progress Description
- Returns:
None
See also
idmtools.entities.iplatform.IPlatform.__wait_until_done_progress_callback()
idmtools.entities.iplatform.IPlatform.wait_till_done()
idmtools.entities.iplatform.IPlatform.__wait_till_callback()
Retrieve all related objects.
- Parameters:
item – SSMTWorkItem
relation_type – Depends or Create
Returns: dict with key the object type
- validate_type(item: IEntity | ItemType, target: ItemType | None = None) NoReturn [source]#
Validate if the item is supported by the platform.
- Parameters:
item – Item to validate
target – Target type to validate against
- Returns:
No return
- is_regather_assets_on_modify() bool [source]#
Return default behaviour for platform when rerunning experiment and gathering assets.
- Returns:
True or false
- is_windows_platform(item: IEntity | None = None) bool [source]#
Returns is the target platform is a windows system.
- property common_asset_path#
Return the path to common assets stored on the platform.
- Returns:
Common Asset Path
- join_path(*args) str [source]#
Join path using platform rules.
- Parameters:
*args – List of paths to join
- Returns:
Joined path as string
- id_from_file(filename: str)[source]#
Load just the id portion of an id file.
- Parameters:
filename – Filename
- Returns:
Item id laoded from file
- get_item_from_id_file(id_filename: PathLike | str, item_type: ItemType | None = None) IEntity [source]#
Load an item from an id file. This ignores the platform in the file.
- Parameters:
id_filename – Filename to load
item_type – Optional item type
- Returns:
Item from id file.
- get_defaults_by_type(default_type: Type) List[IPlatformDefault] [source]#
Returns any platform defaults for specific types. :param default_type: Default type
- Returns:
List of default of that type
- create_sim_directory_map(item_id: str, item_type: ItemType) Dict [source]#
Build simulation working directory mapping. :param item_id: Entity id :param item_type: ItemType
- Returns:
Dict of simulation id as key and working dir as value
- create_sim_directory_df(exp_id: str, include_tags: bool = True) DataFrame [source]#
Build simulation working directory mapping. :param exp_id: experiment id :param include_tags: True/False
- Returns:
DataFrame
- save_sim_directory_df_to_csv(exp_id: str, include_tags: bool = True, output: str = '/home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-idmtools/checkouts/latest/docs', save_header=False, file_name: str | None = None) None [source]#
Save simulation directory df to csv file. :param exp_id: experiment id :param include_tags: True/False :param output: output directory :param save_header: True/False :param file_name: user csv file name
- Returns:
None
- __init__(_uid: str | None = None, _IItem__pre_creation_hooks: ~typing.List[~typing.Callable[[~idmtools.core.interfaces.iitem.IItem, ~idmtools.entities.iplatform.IPlatform], None]] = <factory>, _IItem__post_creation_hooks: ~typing.List[~typing.Callable[[~idmtools.core.interfaces.iitem.IItem, ~idmtools.entities.iplatform.IPlatform], None]] = <factory>, _platform_defaults: ~typing.List[~idmtools.entities.iplatform_default.IPlatformDefault] = <factory>, _config_block: str | None = None) None #